deidentify
FeaturedDe-identify clinical research data before LLM-assisted analysis. Standalone Python CLI detects PHI via regex + heuristics with 10 country locale packs (kr, us, jp, cn, de, uk, fr, ca, au, in). Interactive terminal review. No LLM touches raw data — the script runs locally without any network or AI calls.
Install
Quality Score: 95/100
Skill Content
Details
- Author
- Aperivue
- Repository
- Aperivue/medsci-skills
- Created
- 3 months ago
- Last Updated
- yesterday
- Language
- Python
- License
- MIT
Bundled in these plugins
Similar Skills
Semantically similar based on skill content — not just same category
clean-data
Interactive data profiling and cleaning assistant for medical research. Three-stage workflow (profile, flag, code-generate) with user approval gates at each step. Handles missing values, outliers, duplicates, and type mismatches in CSV/Excel clinical data. Does NOT auto-clean — all decisions require researcher confirmation.
hipaa-deidentification
Selects and executes the correct HIPAA de-identification path — Safe Harbor's 18 identifiers, Expert Determination, or a limited data set under a DUA — and flags residual re-identification risk in the LLM era. Use when someone asks to de-identify or anonymize patient data, mentions de-identification, Safe Harbor, Expert Determination, the 18 identifiers, or a limited data set, or wants test data from production, analytics exports, or AI training corpora built from PHI.
phi-handling
When the user is designing or reviewing the operational controls around PHI — how to de-identify, anonymize, pseudonymize, encrypt, mask, minimize, or securely retain Protected Health Information across structured data, free text, images, audio, and biometrics. Also use when the user mentions "Safe Harbor de-identification," "Expert Determination," "limited data set," "DUA," "k-anonymity," "l-diversity," "t-closeness," "differential privacy," "encryption at rest," "TLS 1.2," "KMS," "HSM," "RBAC," "ABAC," "break the glass," "minimum necessary in practice," "DICOM PHI," "burned-in PHI," "audio PHI," "biometric PHI," "secure deletion," "retention schedule," or "cross-border PHI." For the regulatory backdrop, see hipaa-compliance. For audit-log design, see audit-logging. For EU rules, see gdpr-health-data.