alterlab-rowan

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Drives the Rowan cloud quantum-chemistry platform via its Python API for computational chemistry — pKa prediction, geometry optimization, conformer searching, molecular property calculations, protein-ligand docking (AutoDock Vina), and AI protein cofolding (Chai-1, Boltz-1/2), with cloud compute and no local setup. Use when running DFT or semiempirical methods, neural network potentials (AIMNet2), molecular property or protein-ligand binding predictions, or automated computational chemistry pipelines. Part of the AlterLab Academic Skills suite.

AI & Automation 68 stars 13 forks Updated 3 days ago MIT

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Skill Content

# Rowan: Cloud-Based Quantum Chemistry Platform ## Overview Rowan is a cloud-based computational chemistry platform that provides programmatic access to quantum chemistry workflows through a Python API. It enables automation of complex molecular simulations without requiring local computational resources or expertise in multiple quantum chemistry packages. **Key Capabilities:** - Molecular property prediction (pKa, redox potential, solubility, ADMET-Tox) - Geometry optimization and conformer searching - Protein-ligand docking with AutoDock Vina - AI-powered protein cofolding with Chai-1 and Boltz models - Access to DFT, semiempirical, and neural network potential methods - Cloud compute with automatic resource allocation **Why Rowan:** - No local compute cluster required - Unified API for dozens of computational methods - Results viewable in web interface at labs.rowansci.com - Automatic resource scaling ## When to Use This Skill Use this skill when the user wants to: - Predict pKa / macro-pKa, redox potentials, solubility, or other properties without local QM software - Run geometry optimizations, conformer searches, or single points with NNPs (AIMNet2, Egret), xTB, or DFT in the cloud - Dock ligands (Vina/GNINA) or co-fold protein–ligand complexes (Boltz, Chai-1, OpenFold3) as managed cloud jobs - Script and batch these jobs from Python (`rowan-python`), organized in folders with credit caps ### Does NOT Trigger | Scenario | Use Instead | |----------|-------------| ...

Details

Author
AlterLab-IEU
Repository
AlterLab-IEU/AlterLab-Academic-Skills
Created
6 months ago
Last Updated
3 days ago
Language
Python
License
MIT

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