mine-the-papers-you-were-givenlisted
Install: claude install-skill tangxiangru/AutoR
# The papers in `related_work/` are a work list, not background reading
A supplied paper is not context. It names the tools the field uses on this problem, the
benchmark events results are reported against, the baselines a number is compared to. Those
names are what a reader checks your work for, and they are sitting in a file you already
have.
## The failure this prevents
It is not that runs skip the papers. Measured across a 40-task batch: every task ships them
(median 4 PDFs, median 250,000 characters of extractable text) and **every run referenced
100% of them**. They are opened. They are read for framing. Then the work list is written
from the task statement alone, and everything the papers name goes unused.
Chemistry_002 is the clean case. `CAPRI` appears **30 times** in its supplied papers and
`HADDOCK3` **22 times**. The two graded requirements that name them — a CAPRI round result,
and the tool's consensus scoring workflow — scored **5 and 0**. The report discusses CAPRI
*as a concept* and never reports a CAPRI result. Life_001's papers name `NetMHCpan` five
times; the requirement naming it scored 5.
The shape is always the same: the run knows the field's vocabulary, because it read the
papers, and produces its own analysis in its own terms beside a literature it has
paraphrased rather than used.
## What to do
1. While the papers are open at literature stage, write
`literature/named_from_papers.json`: one row per **proper noun** the supplied papers
attac