drugbank-database

Solid

Access and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies, drug-drug interaction analysis, target identification, chemical similarity searches, ADMET predictions, or any task requiring detailed drug and drug target information from DrugBank.

Data & Documents 27,705 stars 2858 forks Updated today MIT

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50
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Skill Content

# DrugBank Database ## Overview DrugBank is a comprehensive bioinformatics and cheminformatics database containing detailed information on drugs and drug targets. This skill enables programmatic access to DrugBank data including ~9,591 drug entries (2,037 FDA-approved small molecules, 241 biotech drugs, 96 nutraceuticals, and 6,000+ experimental compounds) with 200+ data fields per entry. ## Core Capabilities ### 1. Data Access and Authentication Download and access DrugBank data using Python with proper authentication. The skill provides guidance on: - Installing and configuring the `drugbank-downloader` package - Managing credentials securely via environment variables or config files - Downloading specific or latest database versions - Opening and parsing XML data efficiently - Working with cached data to optimize performance **When to use**: Setting up DrugBank access, downloading database updates, initial project configuration. **Reference**: See `references/data-access.md` for detailed authentication, download procedures, API access, caching strategies, and troubleshooting. ### 2. Drug Information Queries Extract comprehensive drug information from the database including identifiers, chemical properties, pharmacology, clinical data, and cross-references to external databases. **Query capabilities**: - Search by DrugBank ID, name, CAS number, or keywords - Extract basic drug information (name, type, description, indication) - Retrieve chemical properties (SMILE...

Details

Author
davila7
Repository
davila7/claude-code-templates
Created
11 months ago
Last Updated
today
Language
Python
License
MIT

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