ga4gh-standards-validator
SolidGA4GH standards compliance skill for data sharing and interoperability
AI & Automation 1,160 stars
71 forks Updated today MIT
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Skill Content
# GA4GH Standards Validator Skill
## Purpose
Provide GA4GH standards compliance for data sharing and interoperability.
## Capabilities
- VCF/BAM format validation
- htsget API compliance
- Beacon protocol testing
- DRS/WES/TES compliance
- Data model validation
- Interoperability testing
## Usage Guidelines
- Validate file formats against specifications
- Test API compliance for data sharing
- Implement Beacon for variant queries
- Ensure workflow execution standards compliance
- Validate data models for exchange
- Document compliance status
## Dependencies
- GA4GH toolkits
- htslib
- Beacon v2
## Process Integration
- Genomic Data Governance (genomic-data-governance)
- Reproducible Research Workflow (reproducible-research)
Details
- Author
- a5c-ai
- Repository
- a5c-ai/babysitter
- Created
- 4 months ago
- Last Updated
- today
- Language
- JavaScript
- License
- MIT
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