labarchive-integration

Solid

Electronic lab notebook API integration. Access notebooks, manage entries/attachments, backup notebooks, integrate with Protocols.io/Jupyter/REDCap, for programmatic ELN workflows.

AI & Automation 28,028 stars 2882 forks Updated today MIT

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Skill Content

# LabArchives Integration ## Overview LabArchives is an electronic lab notebook platform for research documentation and data management. Access notebooks, manage entries and attachments, generate reports, and integrate with third-party tools programmatically via REST API. ## When to Use This Skill This skill should be used when: - Working with LabArchives REST API for notebook automation - Backing up notebooks programmatically - Creating or managing notebook entries and attachments - Generating site reports and analytics - Integrating LabArchives with third-party tools (Protocols.io, Jupyter, REDCap) - Automating data upload to electronic lab notebooks - Managing user access and permissions programmatically ## Core Capabilities ### 1. Authentication and Configuration Set up API access credentials and regional endpoints for LabArchives API integration. **Prerequisites:** - Enterprise LabArchives license with API access enabled - API access key ID and password from LabArchives administrator - User authentication credentials (email and external applications password) **Configuration setup:** Use the `scripts/setup_config.py` script to create a configuration file: ```bash python3 scripts/setup_config.py ``` This creates a `config.yaml` file with the following structure: ```yaml api_url: https://api.labarchives.com/api # or regional endpoint access_key_id: YOUR_ACCESS_KEY_ID access_password: YOUR_ACCESS_PASSWORD ``` **Regional API endpoints:** - US/International: `h...

Details

Author
K-Dense-AI
Repository
K-Dense-AI/scientific-agent-skills
Created
7 months ago
Last Updated
today
Language
Python
License
MIT

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