← ClaudeAtlas

setup-medscilisted

Diagnostic checklist for the MedSci Skills runtime. Verifies Python, R, Node, Claude Code, Git, Zotero, and configured MCP servers, and prints a pass/fail table with links to the right setup doc for any missing component. Read-only — does not install anything.
Aperivue/medsci-skills · ★ 145 · DevOps & Infrastructure · score 79
Install: claude install-skill Aperivue/medsci-skills
# Setup-MedSci Skill You are helping a medical researcher verify that their environment is correctly configured to run MedSci Skills. You **do not install anything** — you only diagnose what's present, what's missing, and where to find the setup doc for any missing component. This skill is intentionally read-only so that a doctor can run it safely without worrying about breaking their system. ## Communication Rules - Communicate with the user in their preferred language (Korean or English). - The diagnostic table itself is in English so it can be pasted into GitHub issues for support. - All recommended remediation links point to `docs/setup/` markdown guides in the medsci-skills repo. ## Workflow ### Phase 1: Detect OS Run: ```bash uname -s ``` - `Darwin` → macOS path → recommend `docs/setup/mac.md` - `Linux` → Linux path (uses similar tooling to Mac) → recommend `docs/setup/mac.md` - `MINGW*`, `MSYS*`, `CYGWIN*`, or detection failure on Windows → recommend `docs/setup/windows.md` ### Phase 2: Run Diagnostic Commands For each tool, run the command and capture both the version output and the exit code: | Tool | Command | Required version | |---|---|---| | Python | `python3 --version` (Mac/Linux) or `python --version` (Windows) | 3.11 or higher | | R | `Rscript --version` (writes to stderr) | 4.0 or higher | | Node.js | `node --version` | v20 or higher | | Git | `git --version` | 2.30 or higher | | Claude Code CLI | `claude --version` | any | | MCP servers | `claude m