research-graphlisted

Drive a ScientistOS research graph (research.db) using the `science` CLI and the scientistos MCP tools. Use when work touches a research question, literature or paper search, a scientific corpus, an experiment, a result, or a manuscript, and before writing any scientific conclusion so it has graph lineage rather than only chat history. Triggers include "start a research question", "search the literature", "find papers on", "what does the literature say", "index this paper/PDF", "what depends on this claim", "show the research status", "export the graph", "package this run for replay". Do not use for ordinary software tasks, general web research, or any project without a ScientistOS research graph.
Ahmad-Jaradat-Space/scientistos · ★ 0 · AI & Automation · score 60

Install: claude install-skill Ahmad-Jaradat-Space/scientistos

# Running the research graph Say in one short line that you are using the `research-graph` skill before you act, so the user can see which discipline you are working under. The graph is the scientific state. Chat is not. Anything you conclude should be traceable to nodes in `research.db`, or it does not count yet. **Prefer the MCP tools when they cover what you need.** `research_status`, `research_list_nodes`, `research_impact`, `research_integrity`, `research_verify_store`, `corpus_search` and `evidence_prefilter` all exist as typed tools, and they validate arguments for you. Use the CLI below for literature search, corpus indexing and anything the tools do not cover. Binary: `science`. It is on PATH when the project venv is active, and at `.venv/bin/science` when it is not. If neither resolves, the install is broken. Say so rather than guessing at a path. **The graph is always resolved relative to the current directory.** Default graph `research.db`, default corpus `research.corpus.db`, for the CLI and the MCP tools alike. So `cd` into the project that owns the graph before you work, or pass `--db` / `--corpus` with an explicit path. Never create a new `research.db` in a directory just because one was not found there. If the expected graph is missing, stop and ask which project this belongs to. ## When to reach for this Reach for it at the start of research work, not at the end. The common failure is doing the whole investigation in chat and then trying to backfill t